Latest Update：2020/12/15 13:48:57

YAMAMURA Shigeki

Researcher Name: YAMAMURA Shigeki

Div (Section) name/title: Center for Regional Environmental Research（Soil Environment Section）／Senior Researcher

Research Subject: Bioremediation for arsenic-contaminated soil, Microbial cycling of arsenic in the environment

Degree(s): Doctor of engineering

Professional Qualification(s): Bioengineering,Civil Engineering

Environmental Speciality Field: environmental technology,water and soil environment,environmental microbes

URL: http://www.nies.go.jp/chiiki/kenkyusha/yamamura_shigeki.html

Research Subject

Fiscal Year: 2020
- 25196 : Project for the Promotion of Environmental Genomics Studies
- 25292 : Studies on the Application of Microorganisms for the Preservation of the Environment and its Risk Assessment
- 25293 : Development of crystalline antimony recovery technique from wastewater using rare metal-respiring bacteria
- 25393 : Elucidation of mechanism of rhizosphere effects for improvement of water purification capacity in Hybrid floating technology
Fiscal Year: 2019
- 24858 : Project for the Promotion of Environmental Genomics Studies
- 24946 : Elucidation of mechanism of rhizosphere effects for improvement of water purification capacity in Hybrid floating technology
- 24973 : Development of crystalline antimony recovery technique from wastewater using rare metal-respiring bacteria
- 24974 : Studies on the Application of Microorganisms for the Preservation of the Environment and its Risk Assessment
Fiscal Year: 2018
- 24446 : Project for The Promotion of Environmental Genomics studies
- 24562 : Development of the soil remediation system using arsenic-mobilizing bacteria and an arsenic hyperaccumulator plant
- 24563 : Studies on the application of microorganisms for the preservation of the environment and its risk assessment
Fiscal Year: 2017
- 23970 : Project for The Promotion of Environmental Genomics studies
- 23988 : Studies on the application of microorganisms for the preservation of the environment and its risk assessment
- 23989 : Development of the soil remediation system using arsenic-mobilizing bacteria and an arsenic hyperaccumulator plant
Fiscal Year: 2016
- 23484 : Project for The Promotion of Environmental Genomics studies
- 23557 : Studies on diffusion mechanisms of several raremetal elements dissolved from wastes into soil environment and their impact on microbial ecosystems
- 23592 : Development of the soil remediation system using arsenic-mobilizing bacteria and an arsenic hyperaccumulator plant
- 23653 : Studies on the application of microorganisms for the preservation of the environment and its risk assessment
Fiscal Year: 2015
- 23078 : Studies on diffusion mechanisms of several raremetal elements dissolved from wastes into soil environment and their impact on microbial ecosystems
- 23167 : Studies on the application of microorganisms for the preservation of the environment and its risk assessment
Fiscal Year: 2014
- 22857 : Studies on diffusion mechanisms of several raremetal elements dissolved from wastes into soil environment and their impact on microbial ecosystems
- 22858 : Effect of antibiotics on the microbial arsenic mobilization and immobilization
- 22864 : Studies on the application of microorganisms for the preservation of the environment and its risk assessment
Fiscal Year: 2013
- 22323 : Studies on diffusion mechanisms of several raremetal elements dissolved from wastes into soil environment and their impact on microbial ecosystems
- 22395 : Studies on the application of microorganisms for the preservation of the environment and its risk assessment
- 22396 : Effect of antibiotics on the microbial arsenic mobilization and immobilization
- 22423 : Coordinated study on environmental emission, behavior and effect of metals in high-tech products focusing on their lifecycle
Fiscal Year: 2012
- 21999 : Effect of antibiotics on the microbial arsenic mobilization and immobilization
- 22016 : Studies on the application of microorganisms for the preservation of the environment and its risk assessment
- 22060 : Coordinated study on environmental emission, behavior and effect of metals in high-tech products focusing on their lifecycle
Fiscal Year: 2011
- 21505 : Coordinated study on environmental emission, behavior and effect of metals in high-tech products focusing on their lifecycle
- 21567 : Studies on the application of microorganisms for the preservation of the environment and its risk assessment
- 21569 : Effect of antibiotics on the microbial arsenic mobilization and immobilization
Fiscal Year: 2010
- 21033 : The basic research on microbial community structure and evaluation of activity in water soil environment
- 21258 : Evaluation and prediction of nitrogen load from nitrogen saturated forest area and development of its reduction scenario
Fiscal Year: 2009
- 20435 : The basic research on microbial community structure and evaluation of activity in water soil environment
- 20479 : Arsenic removal from contaminated soils by simultaneous use of a dissimilatory arsenate-reducing bacterium and naturally occurring mediators.
Fiscal Year: 2008
- 20112 : Arsenic removal from contaminated soils by simultaneous use of a dissimilatory arsenate-reducing bacterium and naturally occurring mediators.
- 20171 : Evaluation of biodegradation-characteristic of organic compounds in anaerobic treatment of wastewater at ambient temperature
- 20178 : Development of wastewater treatment system that enables recycling of carbon-energy
- 20206 : The basic research on microbial community structure and evaluation of activity in water soil environment
Fiscal Year: 2007
- 10473 : The basic research on microbial community structure and evaluation of activity in water soil environment
- 10502 : Characterization of humic-reducing bacteria and thier application into bioremediation
- 10523 : Development of wastewater treatment system that enables recycling of carbon-energy
- 10567 : Evaluation of biodegradation-characteristic of organic compounds in anaerobic treatment of wastewater at ambient temperature
Fiscal Year: 2006
- 10218 : The basic research on microbial community structure and evaluation of activity in water soil environment
- 10246 : Characterization of humic-reducing bacteria and thier application into bioremediation
- 10262 : Development of wastewater treatment system that enables recycling of carbon-energy
- 10300 : Evaluation of biodegradation-characteristic of organic compounds in anaerobic treatment of wastewater at ambient temperature
Fiscal Year: 2005
- 9493 : The basic research on microbial community structure and evaluation of activity in water soil environment

View all

Research Result (Publication)

all
Original Paper
Book

Original Paper
A novel dimethylsulfoxide reductase family of molybdenum enzyme, Idr, is involved in iodate respiration by Pseudomonas sp. SCT

Presenter : Yamazaki C., Kashiwa S., Horiguchi A., Kasahara Y., Yamamura S., Amachi S.
Title : , Environmental Microbiology, 22(6):2196-2212 (2020)
Original Paper
Draft genome sequence of Geobacter sp. strain SVR, isolated from antimony mine soil

Presenter : Warashina T., Harada M., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , Microbiology Resource Announcements, 9(26):e00461-20 (2020)
Original Paper
Possible involvement of a tetrathionate reductase homolog in dissimilatory arsenate reduction by Anaeromyxobacter sp. strain PSR-1

Presenter : Muramatsu F., Tonomura M., Yamada M., Kasahara Y., Yamamura S., Iino T., Amachi S.
Title : , Applied and Environmental Microbiology, 86(23):e00829-20 (2020)
Original Paper
Draft genome sequence of the antimony-oxidizing Pseudomonas sp. strain SbOxS1, isolated from stibnite mine tailing soil

Presenter : Hamamura N., Nakajima N., Yamamura S.
Title : , Microbiology Resource Announcements, 9(49):e01218-20 (2020)
Original Paper
Draft genome sequence of Stenotrophomonas sp. strain SbOxS2, an antimony-oxidizing bacterium isolated from stibnite mine tailing soil

Presenter : Hamamura N., Nakajima N., Yamamura S.
Title : , Microbiology Resource Announcements, 9(49):e01219-20 (2020)
Original Paper
137Cs transfer from canopies onto forest floors at Mount Tsukuba in the four years following the Fukushima nuclear accident

Presenter : Nishikiori T., Watanabe Mirai., Koshikawa-K.M., Watanabe K., Yamamura S., Hayashi S.
Title : , Science of the Total Environment, 659:783-789 (2019)
Original Paper
Draft genome sequence of a novel lactate-fermenting bacterial strain of the family Sporomusaceae within the class Negativicutes

Presenter : Aoyagi T., Kashiwabara Y., Kurasawa H., Amachi S., Nakajima N., Hori T., Yamamura S.
Title : , Microbiology Resource Announcements, 8(10):e01735-18 (2019)
Original Paper
Genomic analysis of Pseudomonas sp. strain SCT, an iodate-reducing bacterium isolated from marine sediment, reveals a possible use for bioremediation

Presenter : Harada M., Ito K., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , G3: Genes|Genomes|Genetics, 9:1321-1329 (2019)
Original Paper
Vertical variation of bulk and metabolically active prokaryotic community in sediment of a hypereutrophic freshwater lake

Presenter : Tsuboi S., Kohzu A., Imai A., Iwasaki K., Yamamura S.
Title : , Environmental Science and Pollution Research, 26:9379-9389 (2019)
Original Paper
Soil microbial communities involved in reductive dissolution of arsenic from arsenate-laden minerals with different carbon sources

Presenter : Yamamura S., Kurasawa H., Kashiwabara Y., Hori T., Aoyagi T., Nakajima N., Amachi S.
Title : , Environmental Science & Technology, 53:12398-12406 (2019)
Original Paper
Effect of extracellular electron shuttles on arsenic-mobilizing activities in soil microbial communities

Presenter : Yamamura S., Sudo T., Watanabe Mirai., Tsuboi S., Soda S., Ike K., Amachi S.
Title : , Journal of Hazardous Materials, 342:571-578 (2018)
Original Paper
Composition and Elution Behavior of Various Elements from Printed Circuit Boards, Cathode-ray Tube Glass, and Liquid-crystal Displays in Waste Consumer Electronics

Presenter : Inaba K., Murata T., Yamamura S., Nagano M., Iwasaki K., Nakajima D., Takigami H.
Title : , Analytical Sciences, 34(5):583-588 (2018)
Original Paper
Genomic Analysis of Rhodococcus sp. Br-6, a Bromate Reducing Bacterium Isolated From Soil in Chiba, Japan

Presenter : Ito K., Harada M., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , Journal of Genomics, 6:122-126 (2018)
Original Paper
Draft genome sequence of Roseovarius sp. A-2, an iodide-oxidizing bacterium isolated from natural gas brine water, Chiba, Japan

Presenter : Yuliana T., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , Journal of Genomics, 5:51-53 (2017)
Original Paper
Complete degradation of ethyl tert-butyl ether by co-culture of Rhodococcus erythropolis ET10 and Pseudonocardia benzenivorans No. 8

Presenter : Ohkubo N., Tsuboi S., Yamamura S., Iwasaki K., Yagi O.
Title : , Journal of Environmental Biotechnology, 17(1):73-81 (2017)
Original Paper
Growth rates and tolerance to low water temperature of freshwater bacterioplankton strains: ecological insights from shallow hypereutrophic lakes in Japan

Presenter : Watanabe K., Ishii Y., Komatsu N., Kitamura T., Watanabe Mirai., Yamamura S., Imai A., Hayashi S.
Title : , Hydrobiologia, 792(1):67-81 (2017)
Original Paper
Unexpected diversity of pepA genes encoding leucine aminopeptidases in sediments from a freshwater lake

Presenter : Tsuboi S., Yamamura S., Imai A., Iwasaki K.
Title : , Microbes and Environments, 31(1):49-55 (2016)
Original Paper
Impact of arsenite on the bacterial community structure and diversity in soil

Presenter : Dong D.T., Yamamura S., Amachi S.
Title : , Microbes and Environments, 31(1):41-48 (2016)
Original Paper
Microbial nitrification in throughfall of a Japanese cedar associated with archaea from the tree canopy

Presenter : Watanabe K., Kohzu A., Suda W., Yamamura S., Takamatsu T., Takenaka A., Koshikawa-K.M., Hayashi S., Watanabe Mirai.
Title : , SpringerPlus, 5(1596): (2016)
Original Paper
Draft genome sequence of Arenibacter sp. strain C-21, an iodine-accumulating bacterium isolated from surface marine sediment.

Presenter : Ito K., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , Genome Announcements, 4(5):e1155-16 (2016)
Original Paper
Diversity of alkane hydroxylase genes on the rhizoplane of grasses planted in petroleum-contaminated soils.

Presenter : Tsuboi S., Yamamura S., Nakajima-Kambe T., Iwasaki K.
Title : , SpringerPlus, 4(526): (2015)
Original Paper
Effect of Antibiotics on Redox Transformations of Arsenic and Diversity of Arsenite-Oxidizing Bacteria in Sediment Microbial Communities

Presenter : Yamamura S., Watanabe K., Suda W., Tsuboi S., Watanabe Mirai.
Title : , Environmental Science & Technology, 48:350-357 (2014)
Original Paper
Microbiology of inorganic arsenic: From metabolism to bioremediation

Presenter : Yamamura S., Amachi S.
Title : , Journal of Bioscience and Bioengineering, 118(1):1-9 (2014)
Original Paper
Linking Temporal Changes in Bacterial Community Structures with the Detection and Phylogenetic Analysis of Neutral Metalloprotease Genes in the Sediments of a Hypereutrophic Lake

Presenter : Tsuboi S., Yamamura S., Imai A., Satou T., Iwasaki K.
Title : , Microbes and Environments, 29(3):314-321 (2014)
Book
Microbial reduction and mobilization of arsenic for bioremediation of contaminated soil

Presenter : Yamamura S.
Title : , Handbook of Metal Biotechnology, Applications for Environmental Conservation and Sustainability (2012)
Original Paper
Ecological niche separation in the Polynucleobacter subclusters linked to quality of dissolved organic matter: a demonstration using a high sensitivity cultivation-based approach

Presenter : Watanabe K., Komatsu N., Kitamura T., Ishii Y., Park H-D., Miyata R., Noda N., Sekiguchi Y., Satou T., Watanabe Mirai., Yamamura S., Imai A., Hayashi S.
Title : , Environmental Microbiology, 14(9):2511-2525 (2012)
Original Paper
Microbial biomass and nitrogen transformations in surface soils strongly acidified by volcanic hydrogen sulfide deposition in Osorezan, Japan

Presenter : Watanabe Mirai., Yamamura S., Takamatsu T., Koshikawa-K.M., Hayashi S., Murata T., Saito-S.S., Inubushi K., Sakamoto K.
Title : , Soil Sci.Plant Nutr., 56(1):123-132 (2010)
Original Paper
Pollution of montane soil with Cu, Zn, As, Sb, Pb, and nitrate in Kanto, Japan.

Presenter : Takamatsu T., Watanabe Mirai., Koshikawa-K.M., Murata T., Yamamura S., Hayashi S.
Title : , Sci.Total Environ., 408(8):1932-1942 (2010)
Original Paper
Slurry bioreactor modeling using a dissimilatory arsenate-reducing bacterium for remediation of arsenic-contaminated soil

Presenter : Soda S,, Kanzaki M,, Yamamura S., Kashiwa M,, Fujita M,, Ike M,
Title : , J.Biosci.Bioeng., 107(2):130-137 (2009)
Original Paper
Potential for microbially mediated redox transformations and mobilization of arsenic in uncontaminated soils

Presenter : Yamamura S., Watanabe Mirai., Yamamoto N,, Sei K,, Ike M,
Title : , Chemosphere, 77(2):169-174 (2009)
Original Paper
Removal of arsenic from contaminated soils by microbial reduction of arsenate and quinone

Presenter : Yamamura S., Watanabe Mirai., Kanzaki M., Soda S., Ike M.
Title : , Environ.Sci.Technol., 42(16):6154-6159 (2008)
Original Paper
Dry deposition of acidic air pollutants to tree leaves, determined by a modified leaf-washing technique

Presenter : Watanabe Mirai., Takamatsu T., Koshikawa-K.M., Yamamura S., Inubushi K.
Title : , Atmos.Environ., 42(32):7339-7347 (2008)
Bacillus selenatarsenatis sp. nov.,a selenate- and arsenate-reducing bacterium isolated from the effluent drain of a glass-manufacturing plant

Presenter : Yamamura S., Yamashita M.(*1), Fujimoto N.(*1), Kuroda M.(*1), Kashiwa M.(*1), Sei K.(*1), Fujita M.(*1), Ike M.(*1)
Title : , Int.J.Syst.Evol.Microbiol., 57:1060-1064 (2007)

View all

A novel dimethylsulfoxide reductase family of molybdenum enzyme, Idr, is involved in iodate respiration by Pseudomonas sp. SCT

Presenter : Yamazaki C., Kashiwa S., Horiguchi A., Kasahara Y., Yamamura S., Amachi S.
Title : , Environmental Microbiology, 22(6):2196-2212 (2020)
Draft genome sequence of Geobacter sp. strain SVR, isolated from antimony mine soil

Presenter : Warashina T., Harada M., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , Microbiology Resource Announcements, 9(26):e00461-20 (2020)
Possible involvement of a tetrathionate reductase homolog in dissimilatory arsenate reduction by Anaeromyxobacter sp. strain PSR-1

Presenter : Muramatsu F., Tonomura M., Yamada M., Kasahara Y., Yamamura S., Iino T., Amachi S.
Title : , Applied and Environmental Microbiology, 86(23):e00829-20 (2020)
Draft genome sequence of the antimony-oxidizing Pseudomonas sp. strain SbOxS1, isolated from stibnite mine tailing soil

Presenter : Hamamura N., Nakajima N., Yamamura S.
Title : , Microbiology Resource Announcements, 9(49):e01218-20 (2020)
Draft genome sequence of Stenotrophomonas sp. strain SbOxS2, an antimony-oxidizing bacterium isolated from stibnite mine tailing soil

Presenter : Hamamura N., Nakajima N., Yamamura S.
Title : , Microbiology Resource Announcements, 9(49):e01219-20 (2020)
137Cs transfer from canopies onto forest floors at Mount Tsukuba in the four years following the Fukushima nuclear accident

Presenter : Nishikiori T., Watanabe Mirai., Koshikawa-K.M., Watanabe K., Yamamura S., Hayashi S.
Title : , Science of the Total Environment, 659:783-789 (2019)
Draft genome sequence of a novel lactate-fermenting bacterial strain of the family Sporomusaceae within the class Negativicutes

Presenter : Aoyagi T., Kashiwabara Y., Kurasawa H., Amachi S., Nakajima N., Hori T., Yamamura S.
Title : , Microbiology Resource Announcements, 8(10):e01735-18 (2019)
Genomic analysis of Pseudomonas sp. strain SCT, an iodate-reducing bacterium isolated from marine sediment, reveals a possible use for bioremediation

Presenter : Harada M., Ito K., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , G3: Genes|Genomes|Genetics, 9:1321-1329 (2019)
Vertical variation of bulk and metabolically active prokaryotic community in sediment of a hypereutrophic freshwater lake

Presenter : Tsuboi S., Kohzu A., Imai A., Iwasaki K., Yamamura S.
Title : , Environmental Science and Pollution Research, 26:9379-9389 (2019)
Soil microbial communities involved in reductive dissolution of arsenic from arsenate-laden minerals with different carbon sources

Presenter : Yamamura S., Kurasawa H., Kashiwabara Y., Hori T., Aoyagi T., Nakajima N., Amachi S.
Title : , Environmental Science & Technology, 53:12398-12406 (2019)
Effect of extracellular electron shuttles on arsenic-mobilizing activities in soil microbial communities

Presenter : Yamamura S., Sudo T., Watanabe Mirai., Tsuboi S., Soda S., Ike K., Amachi S.
Title : , Journal of Hazardous Materials, 342:571-578 (2018)
Composition and Elution Behavior of Various Elements from Printed Circuit Boards, Cathode-ray Tube Glass, and Liquid-crystal Displays in Waste Consumer Electronics

Presenter : Inaba K., Murata T., Yamamura S., Nagano M., Iwasaki K., Nakajima D., Takigami H.
Title : , Analytical Sciences, 34(5):583-588 (2018)
Genomic Analysis of Rhodococcus sp. Br-6, a Bromate Reducing Bacterium Isolated From Soil in Chiba, Japan

Presenter : Ito K., Harada M., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , Journal of Genomics, 6:122-126 (2018)
Draft genome sequence of Roseovarius sp. A-2, an iodide-oxidizing bacterium isolated from natural gas brine water, Chiba, Japan

Presenter : Yuliana T., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , Journal of Genomics, 5:51-53 (2017)
Complete degradation of ethyl tert-butyl ether by co-culture of Rhodococcus erythropolis ET10 and Pseudonocardia benzenivorans No. 8

Presenter : Ohkubo N., Tsuboi S., Yamamura S., Iwasaki K., Yagi O.
Title : , Journal of Environmental Biotechnology, 17(1):73-81 (2017)
Growth rates and tolerance to low water temperature of freshwater bacterioplankton strains: ecological insights from shallow hypereutrophic lakes in Japan

Presenter : Watanabe K., Ishii Y., Komatsu N., Kitamura T., Watanabe Mirai., Yamamura S., Imai A., Hayashi S.
Title : , Hydrobiologia, 792(1):67-81 (2017)
Unexpected diversity of pepA genes encoding leucine aminopeptidases in sediments from a freshwater lake

Presenter : Tsuboi S., Yamamura S., Imai A., Iwasaki K.
Title : , Microbes and Environments, 31(1):49-55 (2016)
Impact of arsenite on the bacterial community structure and diversity in soil

Presenter : Dong D.T., Yamamura S., Amachi S.
Title : , Microbes and Environments, 31(1):41-48 (2016)
Microbial nitrification in throughfall of a Japanese cedar associated with archaea from the tree canopy

Presenter : Watanabe K., Kohzu A., Suda W., Yamamura S., Takamatsu T., Takenaka A., Koshikawa-K.M., Hayashi S., Watanabe Mirai.
Title : , SpringerPlus, 5(1596): (2016)
Draft genome sequence of Arenibacter sp. strain C-21, an iodine-accumulating bacterium isolated from surface marine sediment.

Presenter : Ito K., Nakajima N., Yamamura S., Tomita M., Suzuki H., Amachi S.
Title : , Genome Announcements, 4(5):e1155-16 (2016)
Diversity of alkane hydroxylase genes on the rhizoplane of grasses planted in petroleum-contaminated soils.

Presenter : Tsuboi S., Yamamura S., Nakajima-Kambe T., Iwasaki K.
Title : , SpringerPlus, 4(526): (2015)
Effect of Antibiotics on Redox Transformations of Arsenic and Diversity of Arsenite-Oxidizing Bacteria in Sediment Microbial Communities

Presenter : Yamamura S., Watanabe K., Suda W., Tsuboi S., Watanabe Mirai.
Title : , Environmental Science & Technology, 48:350-357 (2014)
Microbiology of inorganic arsenic: From metabolism to bioremediation

Presenter : Yamamura S., Amachi S.
Title : , Journal of Bioscience and Bioengineering, 118(1):1-9 (2014)
Linking Temporal Changes in Bacterial Community Structures with the Detection and Phylogenetic Analysis of Neutral Metalloprotease Genes in the Sediments of a Hypereutrophic Lake

Presenter : Tsuboi S., Yamamura S., Imai A., Satou T., Iwasaki K.
Title : , Microbes and Environments, 29(3):314-321 (2014)
Ecological niche separation in the Polynucleobacter subclusters linked to quality of dissolved organic matter: a demonstration using a high sensitivity cultivation-based approach

Presenter : Watanabe K., Komatsu N., Kitamura T., Ishii Y., Park H-D., Miyata R., Noda N., Sekiguchi Y., Satou T., Watanabe Mirai., Yamamura S., Imai A., Hayashi S.
Title : , Environmental Microbiology, 14(9):2511-2525 (2012)
Microbial biomass and nitrogen transformations in surface soils strongly acidified by volcanic hydrogen sulfide deposition in Osorezan, Japan

Presenter : Watanabe Mirai., Yamamura S., Takamatsu T., Koshikawa-K.M., Hayashi S., Murata T., Saito-S.S., Inubushi K., Sakamoto K.
Title : , Soil Sci.Plant Nutr., 56(1):123-132 (2010)
Pollution of montane soil with Cu, Zn, As, Sb, Pb, and nitrate in Kanto, Japan.

Presenter : Takamatsu T., Watanabe Mirai., Koshikawa-K.M., Murata T., Yamamura S., Hayashi S.
Title : , Sci.Total Environ., 408(8):1932-1942 (2010)
Slurry bioreactor modeling using a dissimilatory arsenate-reducing bacterium for remediation of arsenic-contaminated soil

Presenter : Soda S,, Kanzaki M,, Yamamura S., Kashiwa M,, Fujita M,, Ike M,
Title : , J.Biosci.Bioeng., 107(2):130-137 (2009)
Potential for microbially mediated redox transformations and mobilization of arsenic in uncontaminated soils

Presenter : Yamamura S., Watanabe Mirai., Yamamoto N,, Sei K,, Ike M,
Title : , Chemosphere, 77(2):169-174 (2009)
Removal of arsenic from contaminated soils by microbial reduction of arsenate and quinone

Presenter : Yamamura S., Watanabe Mirai., Kanzaki M., Soda S., Ike M.
Title : , Environ.Sci.Technol., 42(16):6154-6159 (2008)
Dry deposition of acidic air pollutants to tree leaves, determined by a modified leaf-washing technique

Presenter : Watanabe Mirai., Takamatsu T., Koshikawa-K.M., Yamamura S., Inubushi K.
Title : , Atmos.Environ., 42(32):7339-7347 (2008)

View all

Microbial reduction and mobilization of arsenic for bioremediation of contaminated soil

Presenter : Yamamura S.
Title : , Handbook of Metal Biotechnology, Applications for Environmental Conservation and Sustainability (2012)

View all

Research Result (Presentation)

all
Research Presentation

Research Presentation
Production of crystalline antimony trioxides by a dissimilatory antimonate-reducing bacteriu

Presenter : Yamamura S., Kobayashi Y., Amachi S.
Name of Society : Water and Environment Technology Conference 2019 (WET2019) (2019)
Name of Proceedings : Abstracts, 38
Research Presentation
Dissolution and migration behavior of major and trace metals derived from electronic waste in soil environment

Presenter : Murata T., Inaba K., Yamamura S., Iwasaki K., Nakajima D., Takigami H.
Name of Society : The 10th international conference of the Working Group (WG) on Soils of Urban, Industrial, Traffic, Mining and Military Areas (SUITMA10) (2019)
Name of Proceedings : SUITMA10 Final Program, 26
Research Presentation
Isolation of a dissimilatory antimonate [Sb(V)]-reducing Geobacteraceae bacterium strain SbR from antimony mine soil.

Presenter : Iida C., Yamamura S., Amachi S.
Name of Society : 23rd International Symposium on Environmental Biogeochemistry (2017)
Name of Proceedings : Abstracts, 64
Research Presentation
Enhancement of arsenic-mobilizing activities in soil microbial communities by electron shuttles.

Presenter : Yamamura S., Amachi S.
Name of Society : 23rd International Symposium on Environmental Biogeochemistry (2017)
Name of Proceedings : Abatracts, 69
Research Presentation
Characterization of soil microbial community involved in reductive dissolution of arsenic with different carbon sources

Presenter : Kurasawa H., Amachi S., Hori T., Yamamura S.
Name of Society : 23rd International Symposium on Environmental Biogeochemistry (2017)
Name of Proceedings : Abstracts, 57
Research Presentation
Genome analysis of Tepidibacillus sp. HK-1: an arsenic-metabolizing bacterium

Presenter : Mizuochi S., Suzuki H., Ito K., Adachi S., Tomita M., Yamamura S., Nakajima N.
Name of Society : Informatics In Biology, Medicine and Pharmacology 2017 (2017)
Name of Proceedings : なし
Research Presentation
Comparison of Bacterial Communities Harboring Alkane Hydroxylase Genes among Petroleum-Contaminated Soils and Roots of Planted Grasses.

Presenter : Tsuboi S., Yamamura S., Nakajima-Kambe T., Iwasaki K.
Name of Society : 9th IWA International Symposium on Waste Management Problems in Agro-Industries (2014)
Name of Proceedings : Abstracts, 218-225
Research Presentation
Microbial community structure on tree leaves

Presenter : Watanabe K. , Watanabe Mirai., Suda W., Koshikawa-K.M., Yamamura S., Nishikiori T., Takenaka A., Tada C., Seiwa K., Hayashi S.
Name of Society : The 28th Annual Meeting of the Japanese Society of Microbial Ecology (2012)
Name of Proceedings : Abstracts, 153
Research Presentation
Ecological niche separation in the Polynucleobacter subclusters linked to quality of dissolved organic matter

Presenter : Watanabe K. , Imai A., Watanabe Mirai., Yamamura S., Hayashi S.
Name of Society : 2012 ASLO Aquatic Science Meeting (2012)
Name of Proceedings : Abstracts, 42
Research Presentation
Role of Redox Active Vitamins in Microbial Arsenic Mobilization

Presenter : Yamamura S., Watanabe K. , Watanabe Mirai., Soda S., Ike M.
Name of Society : IUMS 2011 Sapporo The unlimited world of Micribes (2011)
Name of Proceedings : Abstracts of IUMS 2011 Sapporo The unlimited world of Micribes
Research Presentation
Enhancement of microbial arsenic mobilization by natural mediators

Presenter : Yamamura S., Watanabe Mirai., Soda S., Ike M.
Name of Society : 19th Int.Symp.Environ.Biogeochem. (2009)
Name of Proceedings : Abstracts, 58
Research Presentation
Investigation of a novel psychrotolerant cellulose-degrading Bacteroidales species

Presenter : Tsushima I., Yoochatchaval W., Yamaguchi T., Yamamura S., Yoneyama Y., Syutsubo K.
Name of Society : 12th Int.Symp.Microbial Ecol.(ISME 12) (2008)
Name of Proceedings : Abstracts, 12:977
Research Presentation
Identification and detection of psychrotolerant cellulose-degrading bacteria

Presenter : Tsushima I., Yoochatchaval W., Yamaguchi T.(*1), Yamamura S., Yoneyama Y.(*2), Syutsubo K.
Name of Society : 21st Century COE Program,8th Int.Symp. Nagaoka Univ.Technol.(Poster Session) (2008)
Name of Proceedings : 8th Int.Symp.Proc.
Research Presentation
Effect of an electron-shuttling compound in microbial arsenic mobilization

Presenter : Yamamura S., Watanabe Mirai., Kanzaki M.(*1), Soda S.(*1), Fujita M.(*1), Ike M.(*1)
Name of Society : 18th Int.Symp.Environ.Biogeochem. (2007)
Name of Proceedings : Proceedings
Research Presentation
A bioreactor model for remediation of arsenic-contaminated soil

Presenter : Soda S.(*1), Kanzaki M.(*1), Yamamura S., Kashiwa M.(*2), Fujita M.(*3), Ike M.(*1)
Name of Society : IWA-2nd Aspire Asia Pac.Reg.Group Conf.Exhib. (2007)
Name of Proceedings : Proceedings(USB)

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Comparison of Bacterial Communities Harboring Alkane Hydroxylase Genes among Petroleum-Contaminated Soils and Roots of Planted Grasses.

Presenter : Tsuboi S., Yamamura S., Nakajima-Kambe T., Iwasaki K.
Name of Society : 9th IWA International Symposium on Waste Management Problems in Agro-Industries (2014)
Name of Proceedings : Abstracts, 218-225
Enhancement of microbial arsenic mobilization by natural mediators

Presenter : Yamamura S., Watanabe Mirai., Soda S., Ike M.
Name of Society : 19th Int.Symp.Environ.Biogeochem. (2009)
Name of Proceedings : Abstracts, 58
Identification and detection of psychrotolerant cellulose-degrading bacteria

Presenter : Tsushima I., Yoochatchaval W., Yamaguchi T.(*1), Yamamura S., Yoneyama Y.(*2), Syutsubo K.
Name of Society : 21st Century COE Program,8th Int.Symp. Nagaoka Univ.Technol.(Poster Session) (2008)
Name of Proceedings : 8th Int.Symp.Proc.
Effect of an electron-shuttling compound in microbial arsenic mobilization

Presenter : Yamamura S., Watanabe Mirai., Kanzaki M.(*1), Soda S.(*1), Fujita M.(*1), Ike M.(*1)
Name of Society : 18th Int.Symp.Environ.Biogeochem. (2007)
Name of Proceedings : Proceedings
A bioreactor model for remediation of arsenic-contaminated soil

Presenter : Soda S.(*1), Kanzaki M.(*1), Yamamura S., Kashiwa M.(*2), Fujita M.(*3), Ike M.(*1)
Name of Society : IWA-2nd Aspire Asia Pac.Reg.Group Conf.Exhib. (2007)
Name of Proceedings : Proceedings(USB)
Production of crystalline antimony trioxides by a dissimilatory antimonate-reducing bacteriu

Presenter : Yamamura S., Kobayashi Y., Amachi S.
Name of Society : Water and Environment Technology Conference 2019 (WET2019) (2019)
Name of Proceedings : Abstracts, 38
Dissolution and migration behavior of major and trace metals derived from electronic waste in soil environment

Presenter : Murata T., Inaba K., Yamamura S., Iwasaki K., Nakajima D., Takigami H.
Name of Society : The 10th international conference of the Working Group (WG) on Soils of Urban, Industrial, Traffic, Mining and Military Areas (SUITMA10) (2019)
Name of Proceedings : SUITMA10 Final Program, 26
Isolation of a dissimilatory antimonate [Sb(V)]-reducing Geobacteraceae bacterium strain SbR from antimony mine soil.

Presenter : Iida C., Yamamura S., Amachi S.
Name of Society : 23rd International Symposium on Environmental Biogeochemistry (2017)
Name of Proceedings : Abstracts, 64
Enhancement of arsenic-mobilizing activities in soil microbial communities by electron shuttles.

Presenter : Yamamura S., Amachi S.
Name of Society : 23rd International Symposium on Environmental Biogeochemistry (2017)
Name of Proceedings : Abatracts, 69
Characterization of soil microbial community involved in reductive dissolution of arsenic with different carbon sources

Presenter : Kurasawa H., Amachi S., Hori T., Yamamura S.
Name of Society : 23rd International Symposium on Environmental Biogeochemistry (2017)
Name of Proceedings : Abstracts, 57
Genome analysis of Tepidibacillus sp. HK-1: an arsenic-metabolizing bacterium

Presenter : Mizuochi S., Suzuki H., Ito K., Adachi S., Tomita M., Yamamura S., Nakajima N.
Name of Society : Informatics In Biology, Medicine and Pharmacology 2017 (2017)
Name of Proceedings : なし
Microbial community structure on tree leaves

Presenter : Watanabe K. , Watanabe Mirai., Suda W., Koshikawa-K.M., Yamamura S., Nishikiori T., Takenaka A., Tada C., Seiwa K., Hayashi S.
Name of Society : The 28th Annual Meeting of the Japanese Society of Microbial Ecology (2012)
Name of Proceedings : Abstracts, 153
Ecological niche separation in the Polynucleobacter subclusters linked to quality of dissolved organic matter

Presenter : Watanabe K. , Imai A., Watanabe Mirai., Yamamura S., Hayashi S.
Name of Society : 2012 ASLO Aquatic Science Meeting (2012)
Name of Proceedings : Abstracts, 42
Role of Redox Active Vitamins in Microbial Arsenic Mobilization

Presenter : Yamamura S., Watanabe K. , Watanabe Mirai., Soda S., Ike M.
Name of Society : IUMS 2011 Sapporo The unlimited world of Micribes (2011)
Name of Proceedings : Abstracts of IUMS 2011 Sapporo The unlimited world of Micribes
Investigation of a novel psychrotolerant cellulose-degrading Bacteroidales species

Presenter : Tsushima I., Yoochatchaval W., Yamaguchi T., Yamamura S., Yoneyama Y., Syutsubo K.
Name of Society : 12th Int.Symp.Microbial Ecol.(ISME 12) (2008)
Name of Proceedings : Abstracts, 12:977

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YAMAMURA Shigeki

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